Information for 10-CATGGTGGGTGGC (Motif 22)

A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A G T A C A G T C C G T A C G A T A T C G
p-value:1e-5
log p-value:-1.327e+01
Information Content per bp:1.936
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 24.4bp
Average Position of motif in Background48.8 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CATGGTGGGTGGC--
---CGTGGGTGGTCC
 A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CATGGTGGGTGGC
CAATGCATTGTGGGTA--
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CATGGTGGGTGGC
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATGGTGGGTGGC-
CTTCGTGGGGGGTC
 A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGGTGGGTGGC-----
-GTATTGGGTGGGTAATT
 A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

GLIS1/MA0735.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATGGTGGGTGGC--
GCTTCGTGGGGGGTCT
 A C G T A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATGGTGGGTGGC
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATGGTGGGTGGC-----
--NGTAGGTTGGCATNNN
 A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATGGTGGGTGGC
-NGCGTGGGCGGR
 A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C
A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CATGGTGGGTGGC--
---RGKGGGCGKGGC
 A T G C C G T A A C G T A C T G A C T G A C G T A C T G A C T G A C T G A C G T A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C