Information for 9-TGCGGCCTGTSCAGCA (Motif 17)

A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
Reverse Opposite:
G A C T T C A G G A T C C G A T A T C G T A G C G C T A A G T C G T C A T A C G T C A G A T G C T G A C T C A G A G T C T G C A
p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.679
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.5 +/- 28.0bp
Average Position of motif in Background51.3 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCGGCCTGTSCAGCA
-GTGCCGTGTGCAAA-
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCGGCCTGTSCAGCA-
-GGGCCGTGTGCAAAAA
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCGGCCTGTSCAGCA
GGGGGTGTGTCC----
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCGGCCTGTSCAGCA
-GTGGCGTGACNG---
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCGGCCTGTSCAGCA
---TGCGTG-------
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCGGCCTGTSCAGCA
NNGCGTGTGTGCNGCN
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGCGGCCTGTSCAGCA
------CTGTTCCTGG
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGCGGCCTGTSCAGCA
-ACTTCCTGTT-----
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGCGGCCTGTSCAGCA
-----GCTGTG-----
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGCGGCCTGTSCAGCA
----GHATATKCAT--
 A C G T C T A G A G T C A C T G A T C G A G T C A T G C A C G T T C A G C G A T A T C G A T G C G C T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T