Information for 4-ACTGTTTGAC (Motif 16)

C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C
Reverse Opposite:
T A C G A C G T A G T C C G T A G C T A C G T A G T A C C G T A A C T G A C G T
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.833
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif154.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets56.7 +/- 26.6bp
Average Position of motif in Background51.8 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACTGTTTGAC
ATTGTTA---
 C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTGTTTGAC---
-BTGABTGACAGS
 C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTTTGAC-
TTAATGTTTAACC
 A C G T A C G T C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

MYBL2/MA0777.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTTTGAC----
GACNGTTTAACGGTT
 A C G T C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C A C G T A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTGTTTGAC---
-NTGATTGACAGN
 C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTTTGAC
BRRCVGTTDN--
 A C G T A C G T C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTTTGAC----
NNANTGATTGATNNNN
 A C G T A C G T C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACTGTTTGAC
NNGTANTGTTTTNC
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTGTTTGAC
ATTGTTTAN-
 C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTTTGAC----
NNANTGATTGATNTTN
 A C G T A C G T C G T A G T A C A C G T A C T G C G A T C G A T C G A T T C A G C G T A A T G C A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C