Information for 6-GGGCCCAGTGGTCWGG (Motif 10)

C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
T A G C A G T C G C A T C T A G T C G A A T G C A T G C G T C A A T G C C G A T A C T G C A T G T C A G T A G C G A T C G A T C
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.672
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif33.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.9 +/- 21.7bp
Average Position of motif in Background53.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGCCCAGTGGTCWGG
AGGGGTCAGAGGTCA--
 A C G T C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG--
-CGAACAGTGCTCACTAT
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG
-----CAAAGGTCAG-
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCCCAGTGGTCWGG
AGAGTCCAAAGTCCA--
 A C G T C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG
GAGGTCAAAGGTCA--
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCAGTGGTCWGG
CANAGNNCAAAGTCCA--
 A C G T A C G T C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG
GGGGTCAAAGGTCA--
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG
GGGGTCAAAGGTCA--
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG---
---------GGTCTGGCAT
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGCCCAGTGGTCWGG
GGGGTCAAAGGTCA--
 C T A G C T A G A T C G A G T C G A T C A G T C C G T A T A C G C A G T A T C G T A C G A C G T A G T C C G T A A C T G A C T G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T