Information for 6-CGGCCCCGGCKYYTTG (Motif 9)

A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
Reverse Opposite:
A T G C G T C A T C G A C T G A C T A G G T C A C T A G A T G C G T A C C T A G T A C G A T C G A T C G A G T C T A G C A T C G
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.685
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 29.9bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGGCCCCGGCKYYTTG
-GGCCCCGCCCCC---
 A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGCCCCGGCKYYTTG-
--GCCCCGCCCCCTCCC
 A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGCCCCGGCKYYTTG
NAGCCCCGCCCCCN--
 A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGCCCCGGCKYYTTG
--GCCCCGCCCCC---
 A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCCCCGGCKYYTTG
TCCGCCCCCGCATT---
 A C G T A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGCCCCGGCKYYTTG
TCGACCCCGCCCCTAT-
 A C G T A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGGCCCCGGCKYYTTG
TACGCCCCGCCACTCTG
 A C G T A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCCGGCKYYTTG
CAGGCCNNGGCCNN---
 A C G T A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCCGGCKYYTTG
NNGGCCACGCCTTTN--
 A C G T A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGCCCCGGCKYYTTG
--GCCCCGCCCC----
 A T G C A T C G C T A G T A G C A T G C A T G C A G T C A C T G A T C G A G T C A C G T A G T C A G C T A G C T C A G T T A C G
A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T