Information for 5-ATTAATACTTCTCWGA (Motif 6)

G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
Reverse Opposite:
A G C T A T G C C G T A A C T G C T G A T C A G T C G A C G T A T A C G A C G T G C T A G A C T C A G T C T G A C G T A A C G T
p-value:1e-12
log p-value:-2.824e+01
Information Content per bp:1.697
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.1 +/- 22.1bp
Average Position of motif in Background51.4 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTAATACTTCTCWGA
ATTAAA----------
 G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATACTTCTCWGA
NTAATTAATAT--------
 A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATTAATACTTCTCWGA
CTAATTAA-----------
 A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------ATTAATACTTCTCWGA
GGGTTTAATTAAAATTC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATTAATACTTCTCWGA
ACTAATTAAA----------
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATACTTCTCWGA
GNNNATTAATCCCTNCN---
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------ATTAATACTTCTCWGA
CNNANTAATTAATTNNC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATTAATACTTCTCWGA
GTAATTAA-----------
 A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATACTTCTCWGA
GANNATTAATCCCTNNN---
 A C G T A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------ATTAATACTTCTCWGA
ACCGGCAATTAATAAA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A G C T G T C A C G T A C G A T G T C A A T G C A C G T A C G T A G T C A G C T G T A C G C A T A T C G C T G A
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T