Information for 11-GGCCAAAAGC (Motif 41)

A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C
Reverse Opposite:
A C T G A G T C A C G T A G C T A G C T A C G T A C T G C A T G A G T C A G T C
p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.869
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif131.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets48.1 +/- 27.1bp
Average Position of motif in Background53.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGC----
AAGGTCAAAAGGTCAA
 A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAAAGC---
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGC---
GAGGTCAAAAGGTCA
 A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGC------
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCCAAAAGC
CAAAGGTCAAGGG-
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCCAAAAGC-
ARGAGGMCAAAATGW
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCCAAAAGC
TGCCAA----
 A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGC
CGTGCCAAG---
 A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAAAGC--
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAAAAGC
AAAACAAAGG-
 A C G T A C T G A C T G G T A C G T A C C G T A C T G A C T G A C G T A C T A G G T A C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T