Information for 22-CTATGTTCTCTTGTTG (Motif 40)

A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
Reverse Opposite:
G A T C G T C A T C G A G A T C C G T A C G T A A C T G C G T A C A T G C G T A C T G A A T G C T C G A G C A T C T G A C T A G
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.672
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.9 +/- 21.2bp
Average Position of motif in Background56.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTATGTTCTCTTGTTG
CTTTGTTTACTTTTN-
 A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTTCTCTTGTTG
TNTTATCTTATCTT----
 A C G T A C G T A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGTTCTCTTGTTG
TNNTCCTTTGTTCTNNT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTTCTCTTGTTG
NNNTTTGTTTACTTTTN-
 A C G T A C G T A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTATGTTCTCTTGTTG
-TTTGTTTACTTA---
 A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTATGTTCTCTTGTTG-----
-----TTCAATTGTTCTAAAA
 A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGTTCTCTTGTTG
NNNTCCTTTGTTCTNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CTATGTTCTCTTGTTG
---------ATTGTT-
 A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTATGTTCTCTTGTTG--
---NNATNAATTGTTTNN
 A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTATGTTCTCTTGTTG
---TGTTTACTTT---
 A G T C A G C T C G T A A C G T T A C G A G C T G A C T G A T C G C A T T G A C C G A T A C G T C A T G A G C T A C G T C A T G
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T