Information for 4-TTCCRTGTCCMGGCAG (Motif 4)

G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C T A G C A C T G A C T G A C T G C G T A A G T C C G T A G A T C A T C G A C T G C T G A C G T A
p-value:1e-13
log p-value:-3.222e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 22.4bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTCCRTGTCCMGGCAG
----CTGTTCCTGG--
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTCCRTGTCCMGGCAG
-YCTTTGTTCC-----
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTCCRTGTCCMGGCAG-
TTCNAAGTACTTNNNNN
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTCCRTGTCCMGGCAG
--CTTTGT--------
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTCCRTGTCCMGGCAG
-----TTTCCCAGAAN
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TTCCRTGTCCMGGCAG
------TTCCNGGAAG
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TTCCRTGTCCMGGCAG-
------GTACCCGCATN
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TTCCRTGTCCMGGCAG
-CCWTTGTYYB-----
 G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTCCRTGTCCMGGCAG
NTNNCGTATCCAAGTNN
 A C G T G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTCCRTGTCCMGGCAG
GAGCCCTTGTCCCTAA--
 A C G T A C G T G C A T A G C T A G T C A T G C C T A G C G A T A C T G A C G T G T A C A G T C G T A C A C T G A C T G G T A C G T C A A C T G
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T