Information for 15-TSSWGKGTRKTGA (Motif 38)

A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A T G A C A G T C C G T A A T G C T G A C A G T C C G A T A T G C A T G C C T G A
p-value:1e-6
log p-value:-1.526e+01
Information Content per bp:1.784
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.9 +/- 27.9bp
Average Position of motif in Background51.4 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TSSWGKGTRKTGA----
-----GGTGYTGACAGS
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TSSWGKGTRKTGA-
----GTGGGGTGAT
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TSSWGKGTRKTGA---
----GTGGCGTGACNG
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TSSWGKGTRKTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TSSWGKGTRKTGA
-CGTGGGTGGTCC
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TSSWGKGTRKTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TSSWGKGTRKTGA-
----ATGGGGTGAT
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TSSWGKGTRKTGA-
---TGTGGATTNNN
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TSSWGKGTRKTGA-
----ATGGGGTGAT
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TSSWGKGTRKTGA-
--NTGGGTGTGGCC
 A G C T A T C G A T C G C G T A A C T G A C T G A T C G A C G T C T A G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C