Information for 14-CHTGTTGGGTGGC (Motif 36)

A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G G T A C A G T C C G T A A G T C A G T C A T G C C G T A C T G A A T G C C G T A C G T A A T C G
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.848
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.6 +/- 21.3bp
Average Position of motif in Background48.0 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CHTGTTGGGTGGC
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CHTGTTGGGTGGC
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CHTGTTGGGTGGC-----
-GTATTGGGTGGGTAATT
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CHTGTTGGGTGGC------
--TNNNNGGTGTCATNTNT
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CHTGTTGGGTGGC--
---CGTGGGTGGTCC
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CHTGTTGGGTGGC-
---CTTGAGTGGCT
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CHTGTTGGGTGGC-----
--NGTAGGTTGGCATNNN
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CHTGTTGGGTGGC---
----TTCGGTGGTCGC
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CHTGTTGGGTGGC
CCCCCTGCTGTG----
 A C G T A C G T A C G T A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CHTGTTGGGTGGC-
CTTCGTGGGGGGTC
 A T G C G A C T A C G T A T C G A G C T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A G T C A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C