Information for 5-CCCTAAAAAATATATG (Motif 6)

A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
Reverse Opposite:
G T A C G T C A A C G T G T C A C G A T C G T A A C G T A C G T A C G T A C G T C G A T A C G T C G T A A C T G A C T G A C T G
p-value:1e-14
log p-value:-3.277e+01
Information Content per bp:1.918
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 17.0bp
Average Position of motif in Background48.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAAAAATATATG
TACTGGAAAAAAAA----
 A C G T A C G T A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCTAAAAAATATATG
CCYMATAAAA------
 A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCTAAAAAATATATG
AGCCGAAAAAAAAAT--
 A C G T A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAAAAATATATG
AACCCAATAAAATTCG--
 A C G T A C G T A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCTAAAAAATATATG
-CCAATAAAAC-----
 A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAAAAATATATG
GTTCAAAAAAAAAATTC-
 A C G T A C G T A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTAAAAAATATATG
CTACCAATAAAATTCT--
 A C G T A C G T A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCTAAAAAATATATG
NNNTAACAATTATAN-
 A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCCTAAAAAATATATG--
----AAAAAATCAATAAT
 A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCTAAAAAATATATG
-CCAATAAAAA-----
 A G T C G T A C A G T C A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C T G
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T