Information for 4-AAATGTTCTCAATAAA (Motif 4)

C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C G T C G A T A C T G C T G A C T A G C G T A C G T A A G T C C G T A A G C T C G A T A C G T
p-value:1e-16
log p-value:-3.761e+01
Information Content per bp:1.885
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 17.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA--
--------CCAATAAAAC
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA-----
-----CTACCAATAAAATTCT
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.63
Offset:8
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA--
--------CCAATAAAAA
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.61
Offset:8
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA--
--------CCAATAAAAA
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:AAATGTTCTCAATAAA-
-------CCYMATAAAA
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.60
Offset:8
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA-
--------GCAATAAAA
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAATGTTCTCAATAAA
TAATTGTTCTAAAC---
 A C G T C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA-
-------NCYAATAAAA
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAATGTTCTCAATAAA-----
-----AACCCAATAAAATTCG
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Stat6/MA0520.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAATGTTCTCAATAAA--
---ANTTCTCAGGAANNN
 C G T A C G T A C T G A A C G T A C T G A C G T A C G T A G T C A G C T G T A C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G