Information for 18-TTTTTATACAGGC (Motif 28)

A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A T C G A C G T C G T A A C G T C G T A C G T A C T G A C G T A C G T A
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 22.9bp
Average Position of motif in Background49.3 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTATACAGGC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTATACAGGC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TTTTTATACAGGC-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTTTTATACAGGC-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTATACAGGC
NTGTTTAYATWW--
 A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTATACAGGC--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTATACAGGC
NNNTTTNTAATACNG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTATACAGGC
CBTGTTTAYAWW---
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTATACAGGC
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTTTTATACAGGC
TGTTTACTTAGG-
 A C G T A C G T A G C T A C G T A C G T G T C A A C G T C G T A A T G C C G T A T A C G A C T G A G T C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T