Information for 15-TAGTAAAGTCTAC (Motif 24)

A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
Reverse Opposite:
C T A G A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T C T G A A G T C A C G T C G T A
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.880
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 31.7bp
Average Position of motif in Background47.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAGTAAAGTCTAC
CAAGGTCGTAAAATCTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAGTAAAGTCTAC
AAACCTCGTAAAATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGTAAAGTCTAC
GTCGTAAAAA----
 A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGTAAAGTCTAC
GGTCGTAAAAA----
 A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGTAAAGTCTAC
ACTAGTTAAC-----
 A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TAGTAAAGTCTAC
---AAAAGTCAA-
 A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGTAAAGTCTAC
AAAGCTCGTAAAATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGTAAAGTCTAC
GGTCGTAAAAT----
 A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGTAAAGTCTAC
GCTCGTAAAAA----
 A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGTAAAGTCTAC
TAAAGTCGTAAAACGT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T C G T A C G T A C G T A C T A G A C G T G T A C C G A T C G T A A G T C
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T A C G T A C G T