Information for 13-MWRGMTWAMCATGTAR (Motif 21)

G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T G C A T G T C A A C G T A G T C G A C T C G T A A C T G
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 28.0bp
Average Position of motif in Background63.2 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:MWRGMTWAMCATGTAR---
--NNTTTTACATGTANNNT
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:MWRGMTWAMCATGTAR---
--ANTATTACATGTANNNN
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T
A C G T A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:MWRGMTWAMCATGTAR---
--ANTNNTACATGTANNTN
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T
A C G T A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:MWRGMTWAMCATGTAR----
---AATATACATGTAATATA
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:MWRGMTWAMCATGTAR---
--ANTTNTACATGTANTTN
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:MWRGMTWAMCATGTAR----
---TAAATACATGTAAAATT
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:MWRGMTWAMCATGTAR
-BTVATTWGCATA---
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MWRGMTWAMCATGTAR
WWATRTAAACAN----
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:MWRGMTWAMCATGTAR
-WWTRTAAACAVG---
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G
A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:MWRGMTWAMCATGTAR
----GTAAACAA----
 G T A C C G A T C T G A A C T G G T C A A C G T C G A T C G T A G T C A A G T C C G T A A C G T A C T G A C G T C G T A C T A G
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T