Information for 12-RGYTMACTNCAGCTTC (Motif 20)

C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A C T G A G T C A C G T A T C G A G T C G T C A C A T G C G A T A C G T G C T A C T G A A G T C A G T C
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 14.7bp
Average Position of motif in Background45.6 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:11
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC-
-----------GCTTCC
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC
--------CAAGCTT-
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC-----
----CTCAGCAGCTGCTACTG
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:8
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC--
--------NCAGCTGCTG
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC---
-------AGCAGCTGCTNN
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:RGYTMACTNCAGCTTC-
------NNGCAGCTGTC
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:RGYTMACTNCAGCTTC-
-------CGCAGCTGCG
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:RGYTMACTNCAGCTTC--
--------GCAGCTGTNN
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC
---------CAGCC--
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:RGYTMACTNCAGCTTC-
-------AGCAGCTGCT
 C T A G C T A G A G C T C G A T G T C A C G T A G A T C A C G T A C T G A T G C C G T A A C T G G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T