Information for 7-RTTTRCTCTMWTAMAW (Motif 14)

C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
Reverse Opposite:
C G T A C A G T A C G T C G A T C G T A C G T A A C G T C G T A A T C G C G T A A C T G A G C T C G T A C G T A C G T A A G T C
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 17.1bp
Average Position of motif in Background59.3 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RTTTRCTCTMWTAMAW
TRTTTACTTW-------
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RTTTRCTCTMWTAMAW
TGTTTACTTT-------
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RTTTRCTCTMWTAMAW
TGTTTACTTT-------
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----RTTTRCTCTMWTAMAW
TCCATGTTTACTTTG------
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:RTTTRCTCTMWTAMAW
------NCYAATAAAA
 C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---RTTTRCTCTMWTAMAW
CNTGTTTACATA-------
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RTTTRCTCTMWTAMAW---
---AAAGCTCGTAAAATTT
 C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:RTTTRCTCTMWTAMAW---
---AAACCTCGTAAAATTT
 C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RTTTRCTCTMWTAMAW
BSNTGTTTACWYWGN-----
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RTTTRCTCTMWTAMAW
TGTTTAC----------
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C A C G T A T G C C G A T G T C A C G A T A C G T C G T A G T C A G C T A C G A T
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T