Information for 12-GCTTCTGAAGGCA (Motif 13)

A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C T G G T C A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 31.0bp
Average Position of motif in Background59.1 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTTCTGAAGGCA
GCTTCC-------
 A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCTTCTGAAGGCA
CNNNGCTACTGTANNN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCTTCTGAAGGCA
TNNTGCTACTGTNNNN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTTCTGAAGGCA
ANCAGCTG------
 A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTTCTGAAGGCA--
ANTTCTCAGGAANNN
 A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCTTCTGAAGGCA-
--TTCTNNAGAANT
 A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTTCTGAAGGCA--------
-NNCCTGNAAAAAAAAAAAAA
 A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCTTCTGAAGGCA
-----TGACGTCA
 A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCTTCTGAAGGCA---
----ATGACGTCAYYN
 A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCTGAAGGCA
NGCTN---------
 A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C T G C T A G G T A C C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T