Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-110 | -2.554e+02 | 0.0000 | 270.0 | 35.48% | 3241.5 | 7.21% | motif file (matrix) |
svg |
2 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-110 | -2.541e+02 | 0.0000 | 132.0 | 17.35% | 496.1 | 1.10% | motif file (matrix) |
svg |
3 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-107 | -2.475e+02 | 0.0000 | 243.0 | 31.93% | 2634.5 | 5.86% | motif file (matrix) |
svg |
4 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-104 | -2.417e+02 | 0.0000 | 108.0 | 14.19% | 289.1 | 0.64% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-103 | -2.392e+02 | 0.0000 | 236.0 | 31.01% | 2562.9 | 5.70% | motif file (matrix) |
svg |
6 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-96 | -2.230e+02 | 0.0000 | 322.0 | 42.31% | 5412.5 | 12.03% | motif file (matrix) |
svg |
7 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-95 | -2.199e+02 | 0.0000 | 123.0 | 16.16% | 532.2 | 1.18% | motif file (matrix) |
svg |
8 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-94 | -2.174e+02 | 0.0000 | 208.0 | 27.33% | 2140.9 | 4.76% | motif file (matrix) |
svg |
9 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-85 | -1.959e+02 | 0.0000 | 118.0 | 15.51% | 584.0 | 1.30% | motif file (matrix) |
svg |
10 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-72 | -1.666e+02 | 0.0000 | 208.0 | 27.33% | 2856.8 | 6.35% | motif file (matrix) |
svg |
11 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-67 | -1.547e+02 | 0.0000 | 68.0 | 8.94% | 173.7 | 0.39% | motif file (matrix) |
svg |
12 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-62 | -1.442e+02 | 0.0000 | 108.0 | 14.19% | 759.7 | 1.69% | motif file (matrix) |
svg |
13 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-49 | -1.140e+02 | 0.0000 | 153.0 | 20.11% | 2189.6 | 4.87% | motif file (matrix) |
svg |
14 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-45 | -1.056e+02 | 0.0000 | 143.0 | 18.79% | 2055.4 | 4.57% | motif file (matrix) |
svg |
15 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-45 | -1.049e+02 | 0.0000 | 142.0 | 18.66% | 2039.5 | 4.53% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-44 | -1.030e+02 | 0.0000 | 164.0 | 21.55% | 2738.5 | 6.09% | motif file (matrix) |
svg |
17 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-37 | -8.658e+01 | 0.0000 | 114.0 | 14.98% | 1578.5 | 3.51% | motif file (matrix) |
svg |
18 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-30 | -7.098e+01 | 0.0000 | 86.0 | 11.30% | 1089.2 | 2.42% | motif file (matrix) |
svg |
19 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-28 | -6.609e+01 | 0.0000 | 317.0 | 41.66% | 10460.0 | 23.25% | motif file (matrix) |
svg |
20 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-26 | -6.130e+01 | 0.0000 | 196.0 | 25.76% | 5192.5 | 11.54% | motif file (matrix) |
svg |
21 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.170e+01 | 0.0000 | 36.0 | 4.73% | 621.0 | 1.38% | motif file (matrix) |
svg |
22 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -2.054e+01 | 0.0000 | 127.0 | 16.69% | 4349.2 | 9.67% | motif file (matrix) |
svg |
23 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-8 | -2.003e+01 | 0.0000 | 16.0 | 2.10% | 132.7 | 0.30% | motif file (matrix) |
svg |
24 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-8 | -1.966e+01 | 0.0000 | 80.0 | 10.51% | 2330.7 | 5.18% | motif file (matrix) |
svg |
25 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-6 | -1.569e+01 | 0.0000 | 34.0 | 4.47% | 719.5 | 1.60% | motif file (matrix) |
svg |
26 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-6 | -1.498e+01 | 0.0000 | 34.0 | 4.47% | 742.2 | 1.65% | motif file (matrix) |
svg |
27 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.177e+01 | 0.0001 | 65.0 | 8.54% | 2160.8 | 4.80% | motif file (matrix) |
svg |
28 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-5 | -1.173e+01 | 0.0001 | 57.0 | 7.49% | 1810.3 | 4.02% | motif file (matrix) |
svg |
29 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.148e+01 | 0.0001 | 54.0 | 7.10% | 1696.5 | 3.77% | motif file (matrix) |
svg |
30 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-4 | -1.002e+01 | 0.0005 | 35.0 | 4.60% | 983.0 | 2.19% | motif file (matrix) |
svg |
31 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.283e+00 | 0.0011 | 29.0 | 3.81% | 778.6 | 1.73% | motif file (matrix) |
svg |
32 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-3 | -9.209e+00 | 0.0011 | 43.0 | 5.65% | 1363.7 | 3.03% | motif file (matrix) |
svg |
33 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -9.125e+00 | 0.0012 | 49.0 | 6.44% | 1632.3 | 3.63% | motif file (matrix) |
svg |
34 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -8.868e+00 | 0.0015 | 37.0 | 4.86% | 1127.0 | 2.51% | motif file (matrix) |
svg |
35 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -8.769e+00 | 0.0016 | 72.0 | 9.46% | 2726.1 | 6.06% | motif file (matrix) |
svg |
36 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-3 | -8.748e+00 | 0.0016 | 189.0 | 24.84% | 8751.8 | 19.45% | motif file (matrix) |
svg |
37 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -8.372e+00 | 0.0023 | 42.0 | 5.52% | 1374.1 | 3.05% | motif file (matrix) |
svg |
38 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.364e+00 | 0.0023 | 47.0 | 6.18% | 1597.2 | 3.55% | motif file (matrix) |
svg |
39 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-3 | -8.277e+00 | 0.0024 | 39.0 | 5.12% | 1249.5 | 2.78% | motif file (matrix) |
svg |
40 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.799e+00 | 0.0037 | 17.0 | 2.23% | 385.9 | 0.86% | motif file (matrix) |
svg |
41 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -7.684e+00 | 0.0041 | 60.0 | 7.88% | 2255.6 | 5.01% | motif file (matrix) |
svg |
42 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.676e+00 | 0.0041 | 37.0 | 4.86% | 1202.0 | 2.67% | motif file (matrix) |
svg |
43 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.667e+00 | 0.0041 | 67.0 | 8.80% | 2592.2 | 5.76% | motif file (matrix) |
svg |
44 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -7.280e+00 | 0.0057 | 96.0 | 12.61% | 4077.3 | 9.06% | motif file (matrix) |
svg |
45 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -6.715e+00 | 0.0098 | 51.0 | 6.70% | 1917.2 | 4.26% | motif file (matrix) |
svg |
46 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -6.661e+00 | 0.0101 | 19.0 | 2.50% | 506.0 | 1.12% | motif file (matrix) |
svg |
47 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.333e+00 | 0.0138 | 40.0 | 5.26% | 1435.9 | 3.19% | motif file (matrix) |
svg |
48 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -6.196e+00 | 0.0155 | 31.0 | 4.07% | 1037.2 | 2.31% | motif file (matrix) |
svg |
49 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.070e+00 | 0.0172 | 22.0 | 2.89% | 656.1 | 1.46% | motif file (matrix) |
svg |
50 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.814e+00 | 0.0217 | 11.0 | 1.45% | 239.1 | 0.53% | motif file (matrix) |
svg |
51 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | -5.543e+00 | 0.0279 | 65.0 | 8.54% | 2728.1 | 6.06% | motif file (matrix) |
svg |
52 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.447e+00 | 0.0302 | 105.0 | 13.80% | 4810.5 | 10.69% | motif file (matrix) |
svg |
53 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.179e+00 | 0.0387 | 12.0 | 1.58% | 298.5 | 0.66% | motif file (matrix) |
svg |
54 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -4.977e+00 | 0.0465 | 66.0 | 8.67% | 2852.1 | 6.34% | motif file (matrix) |
svg |
55 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -4.858e+00 | 0.0514 | 87.0 | 11.43% | 3958.6 | 8.80% | motif file (matrix) |
svg |
56 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.798e+00 | 0.0536 | 27.0 | 3.55% | 960.1 | 2.13% | motif file (matrix) |
svg |
57 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -4.745e+00 | 0.0555 | 48.0 | 6.31% | 1974.2 | 4.39% | motif file (matrix) |
svg |
58 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -4.698e+00 | 0.0572 | 5.0 | 0.66% | 74.2 | 0.16% | motif file (matrix) |
svg |
59 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -4.652e+00 | 0.0588 | 66.0 | 8.67% | 2897.7 | 6.44% | motif file (matrix) |
svg |
60 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.645e+00 | 0.0588 | 7.0 | 0.92% | 137.4 | 0.31% | motif file (matrix) |
svg |