Information for 4-CAAAGCAAAGCTCCCT (Motif 10)

G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
Reverse Opposite:
C G T A T C A G C A T G T A C G C T G A T A C G G T A C A C G T A G C T C G A T A T C G G T A C G A C T C G A T C G A T A C T G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.676
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.1 +/- 30.3bp
Average Position of motif in Background58.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAAAGCAAAGCTCCCT
----ACAAAGGNBCCT
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAAGCAAAGCTCCCT
-ACATCAAAGG-----
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGCAAAGCTCCCT
AACACCAAAACAAAGGA----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAAGCAAAGCTCCCT
-AAATCACAGCA----
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAAGCAAAGCTCCCT--
-TAAGCCACGCCCCCTTT
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAAAGCAAAGCTCCCT
-AAAACAAAGG-----
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAAGCAAAGCTCCCT
-ACWTCAAAGG-----
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCAAAGCTCCCT
AGAGTCCAAAGTCCA--
 A C G T G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAAAGCAAAGCTCCCT
-AAAACAATGG-----
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAAAGCAAAGCTCCCT
--ANGNAAAGGTCA--
 G T A C C G T A C G T A C T G A C A T G T A G C C G T A C T G A C G T A A C T G A G T C A G C T A T G C G T A C A G T C C G A T
A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T