Information for 9-WTTCWGWGCACTS (Motif 7)

C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C
Reverse Opposite:
T A C G C G T A A C T G A C G T A C T G A G T C C G A T A G T C C G A T A C T G C G T A C G T A G C A T
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 18.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:WTTCWGWGCACTS----
NNNNTGAGCACTGTNNG
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WTTCWGWGCACTS---
NTNTATGTGCACATNNN
 A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WTTCWGWGCACTS---
NNGTATGTGCACATNNN
 A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:WTTCWGWGCACTS--
-----AASCACTCAA
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:WTTCWGWGCACTS--
-----AAGCACTTAA
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WTTCWGWGCACTS
TTTCTNAGAAAN-
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WTTCWGWGCACTS-----
-TTCNAAGTACTTNNNNN
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WTTCWGWGCACTS
WDNCTGGGCA---
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WTTCWGWGCACTS
-TTCTTGGAAAN-
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:WTTCWGWGCACTS--
-----MRSCACTYAA
 C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A