Information for 8-ACATTGCCTTCTG (Motif 6)

C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G C G T A C G T A A T C G C T A G T A G C G T C A C T G A C A G T A C T G G A C T
p-value:1e-15
log p-value:-3.630e+01
Information Content per bp:1.798
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 21.6bp
Average Position of motif in Background62.9 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACATTGCCTTCTG
GVACAGNMTGTYCTB
 A C G T A C G T C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACATTGCCTTCTG
GRACAGWMTGTYCTB
 A C G T A C G T C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACATTGCCTTCTG
GAACADWATGTTCTT
 A C G T A C G T C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACATTGCCTTCTG--
-----GCCATCTGTT
 C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACATTGCCTTCTG
------GCTTCC-
 C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACATTGCCTTCTG
AGNACANNNTGTNCTN
 A C G T A C G T A C G T C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACATTGCCTTCTG-----
-CCNNACCATCTGGCCTN
 C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACATTGCCTTCTG
ACAAAGGNBCCT-
 C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACATTGCCTTCTG
GGGAACATTGTGTTCCC
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACATTGCCTTCTG-----
---TNTCCTGCTGTGNNG
 C G T A A G T C G C T A G A C T A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G