Information for 11-TAATTTGTAT (Motif 20)

A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C C G T A G T C A C G T A A C G T A C G T C G T A
p-value:1e-7
log p-value:-1.815e+01
Information Content per bp:1.911
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.1 +/- 28.0bp
Average Position of motif in Background64.6 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0144.1_Pou2f2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAATTTGTAT----
TNTAATTTGCATANNN
 A C G T A C G T A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATTTGTAT----
TNTAATTTGCATACNA
 A C G T A C G T A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATTTGTAT----
TNTAATTTGCATACNA
 A C G T A C G T A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATTTGTAT--
TTCATTTGCATAT
 A C G T A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTGTAT---
CTAATTTGCATATT
 A C G T A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTGTAT-
CTCATTTGCATW
 A C G T A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAATTTGTAT--
TAATTTGCATAA
 A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TAATTTGTAT--
--ATTTGCATAT
 A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAATTTGTAT--
TAATTTGCATAA
 A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAATTTGTAT--
--ATTTGCATAA
 A C G T G T C A C G T A C G A T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A