Information for 19-CAGGAAGCAAACT (Motif 19)

A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
Reverse Opposite:
C G T A A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T A G T C A G T C C A G T A C T G
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.819
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets56.5 +/- 18.1bp
Average Position of motif in Background43.9 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGAAGCAAACT
ACAGGAAGTG----
 A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCAAACT
NACAGGAAAT-----
 A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAAGCAAACT
NDCAGGAARTNN---
 A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCAAACT
AACAGGAAGT-----
 A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCAAACT
AACCGGAAGT-----
 A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGGAAGCAAACT-----
--AGCGGCACACACGCAA
 A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGAAGCAAACT
ACCGGAAG------
 A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCAAACT
NACCGGAAGT-----
 A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAAGCAAACT
ANCAGGATGT-----
 A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGGAAGCAAACT
AACAAGGAAGTAA---
 A C G T A C G T A C G T A G T C G T C A C T A G C T A G T C G A C T G A C T A G A G T C C G T A G T C A C G T A A G T C G A C T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T