Information for 16-ATTTGGYTTAAGT (Motif 14)

C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
Reverse Opposite:
T C G A A G T C G A C T C G A T G T C A C G T A T C A G A G T C G T A C G T C A C G T A C T G A A C G T
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.682
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.2 +/- 31.1bp
Average Position of motif in Background42.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGGYTTAAGT---
ACATCTGGWWTYAATTAR
 A C G T A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T A C G T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATTTGGYTTAAGT
--TTGACTTTT--
 C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTGGYTTAAGT
NNNTTAATTGGTTTTT--
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGGYTTAAGT
TAATTAAATTA---
 A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGGYTTAAGT
GNNATTTGTCGTAANN
 A C G T A C G T A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGGYTTAAGT
NNACTTGCCTT----
 A C G T A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATTTGGYTTAAGT
--TTGGCA-----
 C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGGYTTAAGT---
NANAGGGATTAATTATN
 A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGGYTTAAGT
TAATTAAATTA---
 A C G T C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATTTGGYTTAAGT-----
--TTGAGTTAATTAACCT
 C G T A G A C T G A C T A C G T A C T G T A C G A G T C G C A T C A G T G C T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T