Information for 10-CTGMYCCKTGKCC (Motif 8)

A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G G T A C A G T C C G T A T G A C A C T G A C T G C T G A A C T G A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 32.4bp
Average Position of motif in Background42.4 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGCCCTA
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC---
-TGACCTTTGCCCTAN
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGCCCCA
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGACCTC
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC---
-TGACCTCTGACCCCN
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T A C G T
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGACCTN
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGACCCC
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC----
-TGGACTTTGNNCTNTG
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGACCCC
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGMYCCKTGKCC--
-TGACCTTTGACCCC
 A G T C A C G T A C T G G T A C A G C T A G T C A G T C A C T G A C G T A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C