Information for 6-ATCAAACAGA (Motif 6)

G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T C T A G A G C T C G A T A C G T T C A G G C T A A C G T
p-value:1e-12
log p-value:-2.991e+01
Information Content per bp:1.842
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif126.1
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets42.3 +/- 24.6bp
Average Position of motif in Background44.0 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCAAACAGA
ATTAAA----
 G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACAGA
CCATCAATCAAA
 A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAACAGA--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAACAGA--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAACAGA--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAACAGA--
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACAGA
ACATCAAAGGNA
 A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCAAACAGA-
AAACAAACATTC
 A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCAAACAGA
AAATAAACA--
 A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACAGA
TCATCAATCA--
 A C G T A C G T G T C A C G A T A G T C G T C A C G T A C T G A G A T C C G T A A C T G C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T