Information for 16-CTTCATCCAAGGA (Motif 15)

A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A
Reverse Opposite:
A C G T G T A C A G T C G A C T A C G T A C T G A T C G C G T A A C G T A C T G C G T A C G T A A C T G
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.936
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.6 +/- 21.3bp
Average Position of motif in Background38.3 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0082.1_Tcf3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTCATCCAAGGA---
TATAGATCAAAGGAAAA
 A C G T A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTCATCCAAGGA---
NNNAGATCAAAGGANNN
 A C G T A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTCATCCAAGGA---
TATAGATCAAAGGAAAA
 A C G T A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTCATCCAAGGA---
NANAGATCAAAGGGNNN
 A C G T A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTCATCCAAGGA
NNCATTCATTCATNNN
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTCATCCAAGGA
GCTTCC--------
 A C G T A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTCATCCAAGGA-
--ACATCAAAGGNA
 A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTCATCCAAGGA
--ACWTCAAAGG-
 A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTTCATCCAAGGA--
-----NTCAAGGTCA
 A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTTCATCCAAGGA----
-------CAAGGHCANV
 A G T C A C G T A C G T A G T C G T C A A C G T A T G C A G T C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G