p-value: | 1e-9 |
log p-value: | -2.128e+01 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 7.29% |
Number of Background Sequences with motif | 462.1 |
Percentage of Background Sequences with motif | 1.33% |
Average Position of motif in Targets | 52.6 +/- 26.6bp |
Average Position of motif in Background | 48.5 +/- 37.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ACACATTGAT---- ----ATTGATTYND |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACACATTGAT-- CTCACACAATGGCGC |
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Sox17/MA0078.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACACATTGAT -GACAATGNN |
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Myc/MA0147.2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACACATTGAT AAGCACATGG-- |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACACATTGAT----- GACCACATTCATACAAT |
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NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACACATTGAT GTCACGTGGM- |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACACATTGAT-- --CCATTGTTYB |
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SOX9/MA0077.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACACATTGAT- --CCATTGTTC |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACACATTGAT------ --ACATTCATGACACG |
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SOX10/MA0442.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACACATTGAT --ACAAAG-- |
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