Information for 4-TCTCCVGGCTTCGGCA (Motif 5)

A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
Reverse Opposite:
C G A T A C T G A G T C T G A C A T C G T G C A C T G A C T A G A T G C G T A C A C G T A C T G A T C G C T G A A C T G C T G A
p-value:1e-9
log p-value:-2.130e+01
Information Content per bp:1.717
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.9 +/- 15.8bp
Average Position of motif in Background45.0 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCTCCVGGCTTCGGCA--
----CAGGCCNNGGCCNN
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCTCCVGGCTTCGGCA
TCCCCA----------
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TCTCCVGGCTTCGGCA
-------GCTTCC---
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TCTCCVGGCTTCGGCA
TGCCCCCGGGCA------
 A C G T A C G T A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCVGGCTTCGGCA
NCTTCCCGCCC------
 A C G T A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCTCCVGGCTTCGGCA
-CCCCCTGCTGTG---
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TCTCCVGGCTTCGGCA
-----NGCCTNAGGCN
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCTCCVGGCTTCGGCA
-----TGCCTGAGGCN
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TCTCCVGGCTTCGGCA
GACCCCCCGCTGTG---
 A C G T A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:TCTCCVGGCTTCGGCA
---CNAGGCCT-----
 A G C T A G T C A G C T A T G C A G T C T G C A A C T G A T C G A G T C A G C T A C G T T A G C A C T G T A C G A G T C G C T A
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T