Information for 5-TTTTYMAAACAAA (Motif 11)

C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A
Reverse Opposite:
A G C T C G A T G C A T C T A G A C G T A G C T A C G T A C G T C T G A C G T A G T C A C G T A G C T A
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.726
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif132.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets39.3 +/- 25.2bp
Average Position of motif in Background50.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTTTYMAAACAAA---
ATATCAAAACAAAACA
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TTTTYMAAACAAA--
-----AAAACAAAGG
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTYMAAACAAA---
AACACCAAAACAAAGGA
 A C G T C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTTYMAAACAAA----
-AAAGTAAACAAAAATT
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTTYMAAACAAA-
CAAAAGTAAACAAAG
 A C G T C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTYMAAACAAA--
ATTTGCATACAATGG
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTTYMAAACAAA------
--ATAAGAACAAAGGACTA
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTTYMAAACAAA------
--AGAAGAACAAAGGACTA
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTYMAAACAAA---
TAAATGTAAACAAAGGT
 A C G T C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTTYMAAACAAA
-TAAGTAAACAAA
 C A G T A C G T C A G T G C A T A G C T G T C A C G T A C T G A C G T A A G T C C G T A G C T A T C G A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A