Information for 6-ATGGTATCADTVA (Motif 9)

G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A
Reverse Opposite:
A C G T A C G T C G T A G A C T C A G T A C T G C G T A A C G T C T G A T A G C G T A C C G T A C A G T
p-value:1e-14
log p-value:-3.228e+01
Information Content per bp:1.747
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif31.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets35.9 +/- 23.6bp
Average Position of motif in Background44.1 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ATGGTATCADTVA--
---CCATCAATCAAA
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A A C G T A C G T
A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATGGTATCADTVA
ATTGCATCAK---
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGGTATCADTVA
ATTGCATCAT---
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTATCADTVA-
NATGACATCATCNNN
 A C G T G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGGTATCADTVA
ATGACATCATCNN
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGGTATCADTVA
-TGGTTTCAGT--
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATGGTATCADTVA----
-GAAGATCAATCACTTA
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A A C G T A C G T A C G T A C G T
A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATGGTATCADTVA----
-GAAGATCAATCACTAA
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A A C G T A C G T A C G T A C G T
A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGGTATCADTVA-
--GYCATCMATCAT
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A A C G T
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATGGTATCADTVA
---TCATCAATCA
 G C T A A C G T A C T G A T C G G A C T G T C A A C G T A G T C G T C A C T G A A C G T T G C A C G T A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A