Information for 6-GTTTATWTVR (Motif 5)

T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A
Reverse Opposite:
G A C T A G T C G C T A G C T A G C T A G A C T C T G A T G C A G T C A A G T C
p-value:1e-16
log p-value:-3.720e+01
Information Content per bp:1.508
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif504.4
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets57.4 +/- 24.8bp
Average Position of motif in Background50.4 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTTTATWTVR
TGTTTATTT--
 A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATWTVR
NTGTTTAYATWW
 A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTTTATWTVR
TATTGTTTATT---
 A C G T A C G T A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTTTATWTVR
GAATGTTTGTTT--
 A C G T A C G T A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATWTVR----
ANNATTTAATTAATTNN
 A C G T A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A A C G T A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PB0001.1_Arid3a_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATWTVR----
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTTTATWTVR---
--TTATGTAACAT
 T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTTATWTVR-
-NTTAATTGNN
 T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A A C G T
A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C

PH0011.1_Alx1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATWTVR----
NNNAATTAATTAANGNG
 A C G T A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A A C G T A C G T A C G T A C G T
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATWTVR
CBTGTTTAYAWW-
 A C G T A C G T A C G T T C A G C A G T A C G T G A C T C T G A C G A T C G A T C G A T T C A G C T G A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T