Information for 25-TGGTGGVCTTGTAAAA (Motif 32)

C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T C G A T C G T A A G T C C G T A C T G A A C T G A G T C A G T C G T A C C G T A G T A C A T G C C G T A
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.789
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 14.2bp
Average Position of motif in Background46.0 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA-
------GCTCGTAAAAA
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGGTGGVCTTGTAAAA
------CCYMATAAAA
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA---
---AAACCTCGTAAAATTT
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA---
---AAAGCTCGTAAAATTT
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA
------NCYAATAAAA
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA--
------NGYCATAAAWCH
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA--
------CCTTTTATAGNC
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA-
-------CCAATAAAAA
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGGTGGVCTTGTAAAA-
-------CCAATAAAAA
 C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGGVCTTGTAAAA
NNANTGGTGGTCTTNNN---
 A C G T A C G T A C G T A C G T C G A T A T C G A C T G C G A T A C T G A C T G T A C G A G T C A G C T A C G T C T A G C G A T C G T A C G T A C G T A C T G A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T