Information for 20-AGACATAATGGAG (Motif 31)

C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C A G T C G T C A A G C T A C G T C G T A A C G T A C T G A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.838
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.5 +/- 14.6bp
Average Position of motif in Background63.1 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGACATAATGGAG---
TGCGCATAGGGGAGGAG
 A C G T C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACATAATGGAG
---AACAAAGG--
 C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGACATAATGGAG
-VRAACAATGG--
 C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGACATAATGGAG--
---CAAGATGGCGGC
 C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGACATAATGGAG-
BAGTCATANTGAAAG
 A C G T C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGACATAATGGAG
ARGAGGMCAAAATGW--
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGACATAATGGAG-
CTCACACAATGGCGC
 A C G T C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGACATAATGGAG
--RAACAATGGN-
 C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGACATAATGGAG-
AAACAGACAAAGGAAT
 A C G T A C G T C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGACATAATGGAG
---RACAAWGG--
 C G T A A C T G G T C A G T A C C G T A G C A T C G T A C T G A A C G T A C T G A C T G C G T A A T C G
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T