Information for 11-TGSSAAGKTTTSC (Motif 17)

A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C
Reverse Opposite:
C T A G A T C G C G T A C G T A C G T A G T C A A G T C C G A T G A C T A T G C A T G C A G T C G T C A
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 33.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGSSAAGKTTTSC
TTGCCAAG------
 A C G T A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TGSSAAGKTTTSC-
-------TTTTCCA
 A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGSSAAGKTTTSC
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGSSAAGKTTTSC
---CAAGCTT---
 A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGSSAAGKTTTSC---
------ATTTTCCATT
 A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGSSAAGKTTTSC---
------ATTTTCCATT
 A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGSSAAGKTTTSC---
------ATTTTCCATT
 A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGSSAAGKTTTSC
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGSSAAGKTTTSC
CSTGGGAAAD-----
 A C G T A C G T A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TGSSAAGKTTTSC---
------ATTTTCCATT
 A C G T A C T G A T C G A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T