Information for 15-ABGBTTGTATHGGAAG (Motif 14)

C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A T G C A G T C C G T A C G T A C G A T C T G A A G T C C G T A C G T A T C G A A G T C T A G C C G A T
p-value:1e-11
log p-value:-2.633e+01
Information Content per bp:1.765
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.9 +/- 23.6bp
Average Position of motif in Background57.2 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG-
--ATTTGCATAACAAAG
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G A C G T
A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ABGBTTGTATHGGAAG-
--ATTTGCATAACAATG
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G A C G T
A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG
NNANTTTTATTGGNNN
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.56
Offset:11
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG-
-----------NGAAGC
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ABGBTTGTATHGGAAG
NNTGTTTATTTTGGCA-
 A C G T C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG
---ATTGTTTAN----
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG
---NTTTTATTGG---
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG
---NTTTTATTGG---
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ABGBTTGTATHGGAAG
---TTTTTATTGG---
 C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ABGBTTGTATHGGAAG
GAATGTTTGTTT------
 A C G T A C G T C G T A A C T G C T A G A C G T A C G T A C G T A C T G A G C T C G T A A C G T G C A T T C A G A T C G C G T A C G T A A C T G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T