Information for 7-TSAGAAAGGATTA (Motif 11)

A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T G T A C T A G C A C G T C G A T A G C T A G T C A C G T A T G C C T G A
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.829
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.4 +/- 23.6bp
Average Position of motif in Background63.8 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TSAGAAAGGATTA--
-----VRGGATTARN
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TSAGAAAGGATTA-
------NGGATTAA
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TSAGAAAGGATTA------
--TGAAGGGATTAATCATC
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:TSAGAAAGGATTA-
------RGGATTAR
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TSAGAAAGGATTA-
------CGGATTAN
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TSAGAAAGGATTA-
------GGGATTAA
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TSAGAAAGGATTA--
-----NNGGATTAGN
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TSAGAAAGGATTA
-----NGGGATTA
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TSAGAAAGGATTA-
---AAGAGGATTAG
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TSAGAAAGGATTA------
--AGAGGGGATTAATTTAT
 A G C T A T C G C G T A A C T G C T G A C G T A C G T A A T C G A C T G G T C A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T