Information for 10-GCAGGTGGCAGCTCCA (Motif 10)

C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
Reverse Opposite:
C G A T C T A G A C T G C G T A A T C G A G T C G A C T A C T G A G T C G T A C G C T A A G T C G T A C C G A T A T C G G A T C
p-value:1e-13
log p-value:-3.145e+01
Information Content per bp:1.740
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.7 +/- 26.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGGCAGCTCCA
SDGCAGGTGCNS------
 A C G T A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCAGCTCCA
NNCAGGTGNN-------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGGCAGCTCCA
AACAGGTGT--------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCAGCTCCA
AACAGATGGC-------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAGGTGGCAGCTCCA
-ADGGYAGYAGCATCT
 C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCAGCTCCA
NNCAGGTGTN-------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCAGCTCCA
NNCAGGTGCG-------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCAGCTCCA
GACAGGTGTN-------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCAGCTCCA
AACAGGTGNT-------
 A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAGGTGGCAGCTCCA
ATCCACAGGTGCGAAAA---
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A C T G C T A G C G A T A C T G A C T G T A G C C T G A C T A G A T G C C G A T G T A C G A T C G C T A
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T A C G T A C G T