Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-159 | -3.666e+02 | 0.0000 | 344.0 | 48.18% | 4146.3 | 9.17% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-152 | -3.520e+02 | 0.0000 | 344.0 | 48.18% | 4349.5 | 9.62% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-151 | -3.489e+02 | 0.0000 | 371.0 | 51.96% | 5274.3 | 11.66% | motif file (matrix) |
svg |
4 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-123 | -2.844e+02 | 0.0000 | 116.0 | 16.25% | 269.9 | 0.60% | motif file (matrix) |
svg |
5 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-110 | -2.535e+02 | 0.0000 | 252.0 | 35.29% | 3024.9 | 6.69% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-102 | -2.355e+02 | 0.0000 | 250.0 | 35.01% | 3225.7 | 7.13% | motif file (matrix) |
svg |
7 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-80 | -1.862e+02 | 0.0000 | 102.0 | 14.29% | 452.9 | 1.00% | motif file (matrix) |
svg |
8 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-77 | -1.784e+02 | 0.0000 | 92.0 | 12.89% | 360.0 | 0.80% | motif file (matrix) |
svg |
9 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-76 | -1.770e+02 | 0.0000 | 75.0 | 10.50% | 189.0 | 0.42% | motif file (matrix) |
svg |
10 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-70 | -1.624e+02 | 0.0000 | 139.0 | 19.47% | 1289.6 | 2.85% | motif file (matrix) |
svg |
11 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-67 | -1.558e+02 | 0.0000 | 263.0 | 36.83% | 5239.6 | 11.58% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-65 | -1.498e+02 | 0.0000 | 214.0 | 29.97% | 3611.0 | 7.98% | motif file (matrix) |
svg |
13 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-60 | -1.394e+02 | 0.0000 | 100.0 | 14.01% | 707.1 | 1.56% | motif file (matrix) |
svg |
14 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-56 | -1.306e+02 | 0.0000 | 191.0 | 26.75% | 3248.0 | 7.18% | motif file (matrix) |
svg |
15 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-55 | -1.287e+02 | 0.0000 | 211.0 | 29.55% | 3985.4 | 8.81% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-55 | -1.270e+02 | 0.0000 | 219.0 | 30.67% | 4321.4 | 9.55% | motif file (matrix) |
svg |
17 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-42 | -9.799e+01 | 0.0000 | 125.0 | 17.51% | 1814.2 | 4.01% | motif file (matrix) |
svg |
18 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-32 | -7.593e+01 | 0.0000 | 211.0 | 29.55% | 5638.3 | 12.46% | motif file (matrix) |
svg |
19 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-31 | -7.201e+01 | 0.0000 | 121.0 | 16.95% | 2235.3 | 4.94% | motif file (matrix) |
svg |
20 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-24 | -5.647e+01 | 0.0000 | 147.0 | 20.59% | 3692.8 | 8.16% | motif file (matrix) |
svg |
21 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-23 | -5.353e+01 | 0.0000 | 29.0 | 4.06% | 127.9 | 0.28% | motif file (matrix) |
svg |
22 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-17 | -4.144e+01 | 0.0000 | 222.0 | 31.09% | 7943.0 | 17.56% | motif file (matrix) |
svg |
23 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-17 | -3.997e+01 | 0.0000 | 142.0 | 19.89% | 4193.8 | 9.27% | motif file (matrix) |
svg |
24 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-14 | -3.300e+01 | 0.0000 | 102.0 | 14.29% | 2788.9 | 6.17% | motif file (matrix) |
svg |
25 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-13 | -3.059e+01 | 0.0000 | 97.0 | 13.59% | 2686.3 | 5.94% | motif file (matrix) |
svg |
26 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-12 | -2.918e+01 | 0.0000 | 20.0 | 2.80% | 137.1 | 0.30% | motif file (matrix) |
svg |
27 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-11 | -2.587e+01 | 0.0000 | 91.0 | 12.75% | 2655.5 | 5.87% | motif file (matrix) |
svg |
28 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.521e+01 | 0.0000 | 134.0 | 18.77% | 4678.8 | 10.34% | motif file (matrix) |
svg |
29 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-10 | -2.433e+01 | 0.0000 | 101.0 | 14.15% | 3182.2 | 7.03% | motif file (matrix) |
svg |
30 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-9 | -2.276e+01 | 0.0000 | 75.0 | 10.50% | 2121.6 | 4.69% | motif file (matrix) |
svg |
31 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.234e+01 | 0.0000 | 59.0 | 8.26% | 1483.9 | 3.28% | motif file (matrix) |
svg |
32 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.209e+01 | 0.0000 | 65.0 | 9.10% | 1735.3 | 3.84% | motif file (matrix) |
svg |
33 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.076e+01 | 0.0000 | 95.0 | 13.31% | 3120.0 | 6.90% | motif file (matrix) |
svg |
34 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-5 | -1.232e+01 | 0.0000 | 30.0 | 4.20% | 742.0 | 1.64% | motif file (matrix) |
svg |
35 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-5 | -1.203e+01 | 0.0001 | 57.0 | 7.98% | 1922.7 | 4.25% | motif file (matrix) |
svg |
36 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.177e+01 | 0.0001 | 16.0 | 2.24% | 265.0 | 0.59% | motif file (matrix) |
svg |
37 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.123e+01 | 0.0001 | 17.0 | 2.38% | 309.7 | 0.68% | motif file (matrix) |
svg |
38 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.122e+01 | 0.0001 | 51.0 | 7.14% | 1698.9 | 3.76% | motif file (matrix) |
svg |
39 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -1.075e+01 | 0.0002 | 60.0 | 8.40% | 2155.5 | 4.76% | motif file (matrix) |
svg |
40 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.052e+01 | 0.0002 | 58.0 | 8.12% | 2076.8 | 4.59% | motif file (matrix) |
svg |
41 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -1.001e+01 | 0.0004 | 40.0 | 5.60% | 1274.3 | 2.82% | motif file (matrix) |
svg |
42 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-4 | -9.838e+00 | 0.0005 | 42.0 | 5.88% | 1375.9 | 3.04% | motif file (matrix) |
svg |
43 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-4 | -9.515e+00 | 0.0006 | 76.0 | 10.64% | 3056.2 | 6.76% | motif file (matrix) |
svg |
44 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.851e+00 | 0.0012 | 18.0 | 2.52% | 413.6 | 0.91% | motif file (matrix) |
svg |
45 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.095e+00 | 0.0025 | 48.0 | 6.72% | 1783.0 | 3.94% | motif file (matrix) |
svg |
46 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -6.975e+00 | 0.0074 | 51.0 | 7.14% | 2031.6 | 4.49% | motif file (matrix) |
svg |
47 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-3 | -6.965e+00 | 0.0074 | 23.0 | 3.22% | 697.1 | 1.54% | motif file (matrix) |
svg |
48 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -6.950e+00 | 0.0074 | 29.0 | 4.06% | 966.8 | 2.14% | motif file (matrix) |
svg |
49 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.823e+00 | 0.0081 | 14.0 | 1.96% | 334.8 | 0.74% | motif file (matrix) |
svg |
50 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.727e+00 | 0.0087 | 23.0 | 3.22% | 710.4 | 1.57% | motif file (matrix) |
svg |
51 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.574e+00 | 0.0100 | 62.0 | 8.68% | 2640.9 | 5.84% | motif file (matrix) |
svg |
52 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.455e+00 | 0.0110 | 57.0 | 7.98% | 2392.6 | 5.29% | motif file (matrix) |
svg |
53 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.447e+00 | 0.0110 | 40.0 | 5.60% | 1529.9 | 3.38% | motif file (matrix) |
svg |
54 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.400e+00 | 0.0112 | 27.0 | 3.78% | 910.9 | 2.01% | motif file (matrix) |
svg |
55 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.386e+00 | 0.0112 | 95.0 | 13.31% | 4448.3 | 9.83% | motif file (matrix) |
svg |
56 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.380e+00 | 0.0112 | 15.0 | 2.10% | 390.9 | 0.86% | motif file (matrix) |
svg |
57 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.355e+00 | 0.0112 | 57.0 | 7.98% | 2403.6 | 5.31% | motif file (matrix) |
svg |
58 |
| ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.317e+00 | 0.0113 | 4.0 | 0.56% | 32.8 | 0.07% | motif file (matrix) |
svg |
59 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.286e+00 | 0.0115 | 49.0 | 6.86% | 1997.8 | 4.42% | motif file (matrix) |
svg |
60 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.262e+00 | 0.0116 | 34.0 | 4.76% | 1251.3 | 2.77% | motif file (matrix) |
svg |
61 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.219e+00 | 0.0119 | 8.0 | 1.12% | 140.2 | 0.31% | motif file (matrix) |
svg |
62 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.106e+00 | 0.0131 | 33.0 | 4.62% | 1215.8 | 2.69% | motif file (matrix) |
svg |
63 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.794e+00 | 0.0176 | 31.0 | 4.34% | 1143.4 | 2.53% | motif file (matrix) |
svg |
64 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.304e+00 | 0.0283 | 38.0 | 5.32% | 1534.7 | 3.39% | motif file (matrix) |
svg |
65 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.112e+00 | 0.0337 | 17.0 | 2.38% | 536.7 | 1.19% | motif file (matrix) |
svg |
66 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.080e+00 | 0.0343 | 15.0 | 2.10% | 450.7 | 1.00% | motif file (matrix) |
svg |
67 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.071e+00 | 0.0343 | 30.0 | 4.20% | 1154.2 | 2.55% | motif file (matrix) |
svg |
68 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.042e+00 | 0.0346 | 36.0 | 5.04% | 1458.2 | 3.22% | motif file (matrix) |
svg |
69 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -4.835e+00 | 0.0419 | 104.0 | 14.57% | 5216.8 | 11.53% | motif file (matrix) |
svg |
70 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.630e+00 | 0.0507 | 9.0 | 1.26% | 222.6 | 0.49% | motif file (matrix) |
svg |
71 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.610e+00 | 0.0510 | 22.0 | 3.08% | 801.3 | 1.77% | motif file (matrix) |
svg |