Information for 10-DGAGAACATTCAG (Motif 7)

C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G
Reverse Opposite:
A G T C C G A T T A C G C G T A T C G A C G A T A C T G A C G T A C G T A G T C A C G T A G T C G A C T
p-value:1e-13
log p-value:-3.019e+01
Information Content per bp:1.835
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.6 +/- 23.3bp
Average Position of motif in Background56.3 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:DGAGAACATTCAG---
-VAGRACAKNCTGTBC
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:DGAGAACATTCAG---
-VAGRACAKWCTGTYC
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:DGAGAACATTCAG-----
-GACCACATTCATACAAT
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:DGAGAACATTCAG---
-AAGAACATWHTGTTC
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:DGAGAACATTCAG------
-----ACATTCATGACACG
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--DGAGAACATTCAG
NTTNAGAACAATTA-
 A C G T A C G T C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----DGAGAACATTCAG
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:DGAGAACATTCAG----
-NAGAACAGNCTGTNCT
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:DGAGAACATTCAG----
-NAGNACANNNTGTNCT
 C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---DGAGAACATTCAG-
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T C T G A T C A G C G T A C T A G G T C A C G T A A G T C C G T A A G C T A C G T A T G C C G T A A C T G A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T