Information for 23-CTCTCTCTCTCTC (Motif 28)

A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
Reverse Opposite:
A T C G C G T A A C T G C G T A T A C G C T G A A C T G C T G A A C T G C T G A T C A G C G T A T C A G
p-value:1e-6
log p-value:-1.521e+01
Information Content per bp:1.795
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif88.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets42.8 +/- 16.0bp
Average Position of motif in Background56.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCTCTC
TCACTTTCACTTTCN-
 A C G T A C G T A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCTC
ACTTTCACTTTC--
 A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTCTCTCTC
NCTTCCCGCCC----
 A C G T A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCTCTC--
ACCACTCTCGGTCAC
 A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCTCTCTCTCTC--
--CTGTCTGTCACCT
 A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCTCTC-
CCCCCGCCCCCGCC
 A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCTC
ACTTTCACTTTC--
 A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTCTCTCTC
NYTTCCCGCC-----
 A C G T A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTCTCTCTC
CACTTCCTCT-----
 A C G T A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTCTCTCTCTC--
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C G A C T A G T C A G C T A G T C G A C T A T G C G C A T A G T C G A C T A T G C A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C