Information for 11-CTTTATCGCT (Motif 26)

A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G G A T C A T C G C G T A A C G T C G T A C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.889
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif113.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets54.2 +/- 31.3bp
Average Position of motif in Background50.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTTTATCGCT-
TTTTATGGCTN
 A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTTATCGCT
TTTTATTGC-
 A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTTTATCGCT
NTTTTATGAC-
 A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTATCGCT
DGWTTTATGRCN
 A C G T A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTTTATCGCT--
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTTATCGCT
NTTTTATTACN
 A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTTATCGCT
TTTTTATTGC-
 A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTATCGCT---
NAATTTTATTACCNNN
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTTATCGCT--
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTTATCGCT
TCTTATCT--
 A G T C A C G T A C G T A C G T G T C A A C G T T A G C C T A G A G T C A C G T
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T