Information for 15-TTTGAGTTCTGTAAAC (Motif 20)

A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
Reverse Opposite:
A T C G C G A T C G A T A C G T T C G A G T A C C G T A C T A G C G T A C G T A A T G C C G A T A G T C C G T A T C G A G T C A
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.5 +/- 26.3bp
Average Position of motif in Background65.6 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0116.1_Nkx2-9/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAGTTCTGTAAAC
NATTTAAGTACTTNAAA-
 A C G T A C G T A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAGTTCTGTAAAC
NATTTAAGTACTTANNA-
 A C G T A C G T A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTGAGTTCTGTAAAC
-TTGACTTTT------
 A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTTGAGTTCTGTAAAC
--TGAATTATGCAT--
 A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTTGAGTTCTGTAAAC
-----RTTATGYAAB-
 A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
A C G T A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TTTGAGTTCTGTAAAC--
----GGTTCCNNAATTTG
 A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAGTTCTGTAAAC
TTCNAAGTACTTNNNNN
 A C G T A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAGTTCTGTAAAC
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAGTTCTGTAAAC
CNTTAAGTACTTAANG-
 A C G T A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAGTTCTGTAAAC
GTTTCACTTCCG-----
 A C G T A C G T A G C T C G A T C T A G G C T A A T C G C G A T C G A T A G T C C G A T A C T G A G C T G T C A C G T A C G T A A T G C
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T