Information for 10-CMCTAGATCM (Motif 19)

A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G C G T A A C G T A G T C A G C T C G T A A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 19.3bp
Average Position of motif in Background55.3 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CMCTAGATCM---
NGNTCTAGAACCNGV
 A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CMCTAGATCM
GGCCATAAATCA
 A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CMCTAGATCM----
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CMCTAGATCM-
GGCCATAAATCAC
 A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CMCTAGATCM--
TATCATTAGAACGCT
 A C G T A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CMCTAGATCM
GCCATAAATCA
 A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CMCTAGATCM
NSCACTYVAV--
 A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CMCTAGATCM
CCACTTGAA--
 A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CMCTAGATCM-----
ACCGGTTGATCACCTGA
 A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CMCTAGATCM
GGCCATAAATCA
 A C G T A C G T A G T C G T C A A G T C A C G T C T G A A C T G C G T A A C G T A G T C G T C A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A