Information for 16-AATTTTAATTGAG (Motif 16)

G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G
Reverse Opposite:
A G T C C G A T A G T C C G T A C G T A A G C T G A C T C G T A G T C A C G T A C G T A C G A T A C G T
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.744
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.1 +/- 21.3bp
Average Position of motif in Background44.4 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAATTGAG---
NNNTTTTAATTAANNNN
 A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0101.1_Lmx1b/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAATTGAG---
AGTTTTTAATTAATTTG
 A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0100.1_Lmx1a/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAATTGAG---
NNTTTTTAATTAATTCG
 A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATTTTAATTGAG
--TTTTTATTGC-
 G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G
A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAATTGAG---
ANNATTTAATTAATTNN
 A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0091.1_Lhx1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAATTGAG---
NNTTATTAATTAATNCN
 A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AATTTTAATTGAG
---TTTAATTGCN
 G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G
A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AATTTTAATTGAG
-ATATTAATTAA-
 G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAATTGAG---
NNTATTTAATTAATTNN
 A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTAATTGAG--
NTNAATTTTATTGNATT
 A C G T A C G T G T C A G C T A C G A T C G A T A C G T G A C T C G T A C T G A G C A T A C G T C T A G G C T A A C T G A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T