Information for 12-GAACAAACTGAGTGCT (Motif 12)

A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G G T A C C G T A A T G C A C G T A T G C G T C A A T C G A C G T A C G T C G A T A T C G C G A T C G A T A T G C
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.779
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.1 +/- 20.5bp
Average Position of motif in Background50.8 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GAACAAACTGAGTGCT-
-------TTAAGTGCTT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Sox11/MA0869.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAACAAACTGAGTGCT
-AACAATTTCAGTGTT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

SOX21/MA0866.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAACAAACTGAGTGCT
-AACAATGGTAGTGTT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T
A C G T C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAACAAACTGAGTGCT-
------CTTGAGTGGCT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

SOX4/MA0867.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAACAAACTGAGTGCT
GAACAATTGCAGTGTT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAACAAACTGAGTGCT------
-----CGAACAGTGCTCACTAT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAACAAACTGAGTGCT-
-------TTRAGTGSYK
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GAACAAACTGAGTGCT-
-------TTGAGTGSTT
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GAACAAACTGAGTGCT
-------TTAAGTGC-
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GAACAAACTGAGTGCT----
---TNNNATGATTTCNNCNN
 A T C G C G T A C G T A A T G C C G T A G T C A G T C A T A G C A C G T A T C G C G T A A T C G C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T