Information for 19-GGAAACCCTC (Motif 45)

A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A C T G A C G T A C G T A G C T A G T C A G T C
p-value:1e-6
log p-value:-1.412e+01
Information Content per bp:1.961
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.2 +/- 30.9bp
Average Position of motif in Background50.7 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGAAACCCTC
GGAAATCCCC
 A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAAACCCTC
GGAAATTCCC
 A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGAAACCCTC
GGAAANCCCC
 A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAAACCCTC-
GGGAAATCCCCN
 A C G T A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAAACCCTC
GGAAATTCCC
 A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAAACCCTC------
AGGAGACCCCCAATTTG
 A C G T A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACCCTC
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAAACCCTC
ACTGAAACCA--
 A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAAACCCTC
GGGGGAATCCCC
 A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAAACCCTC
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G T C A G T C A G T C A C G T A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T