Information for 19-AAAGTGCACTATG (Motif 34)

C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A C G A T C G T A A T C G A C G T A C T G G T A C G T C A A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 26.9bp
Average Position of motif in Background58.5 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCACTATG
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCACTATG
GAAAAAATTGCAAGG--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTGCACTATG
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTGCACTATG
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGTGCACTATG
CAAAGGTCAG----
 A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCACTATG
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAAGTGCACTATG----
-CAATGCATTGTGGGTA
 C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTGCACTATG
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTGCACTATG--
NNNNTGAGCACTGTNNG
 A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTGCACTATG
TTAAGTGC------
 A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T